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钟山新秀

陈晨

发布时间:2022年10月10日 15:10 | 编辑:成丹 | 作者:

陈晨,南京农业大学生科院,博士生导师/副教授,南京农业大学钟山学术新秀,生科院研究生第四支部党支部书记,2020年度南京农业大学“优秀学生教育管理工作者”。

联系方式:025-84396391;邮箱:chenchen@njau.edu.cn;

地址:南京农业大学生科楼C2015

一. 研究方向:

1. 植物适应性进化的表观遗传变异

2. 重金属污染环境的生物修复

3. 植物-微生物的互作

欢迎对以上研究方向感兴趣并有志于从事相关科学研究的同学报考本人博士和硕士研究生。

招生方向:植物表观遗传学和功能基因组学、植物-微生物互作及效应、污染环境的生物修复。

二. 受教育和工作经历:

2015/12-今,南京农业大学,生命科学学院植物生物学系,副教授

2019/11-2020/10,德国图宾根大学,植物生态与进化研究所,访问学者

2016/08-2016/10,以色列农业研究组织,访问学者

2015/07-2015/09,东京大学农学部,特聘讲师

2013/06-2015/12,南京农业大学,生命科学学院植物生物学系,讲师

2012/01 - 2012/07,德国海德堡大学,植物科学系,联合培养

2008/09 - 2013/06,浙江大学,生命科学学院生态所,植物学博士

2004/09 - 2008/07,南京农业大学,国家生物学理科基地,理学学士


教学情况


本科生课程:《植物生理学》、《植物生理学实验》、《生物信息学》、《基因组学》

研究生课程:研究生课程:《植物营养生理及其研究技术》、《植物学与发育生物学研究进展》



科研情况


代表性论文:

  1. Chen C, Zheng Z, Bao Y, Zhang H, Richards CL, Li J, Chen Y, Zhao Y, Shen Z and Fu C (2020) Comparisons of Natural and Cultivated Populations of Corydalis yanhusuo Indicate Divergent Patterns of Genetic and Epigenetic Variation. Front. Plant Sci. 11:985. doi: 10.3389/fpls.2020.00985

  2. Huo K, Shangguan X, Xia Y, Shen Z, Chen, C* . (2019). Excess copper inhibits the growth of rice seedlings by decreasing uptake of nitrate. Ecotoxicology and Environmental Safety, 190, 110105.

  3. Xu X, Zarecki R, Medina S, Ofaim S, Liu X, Chen C, ... & Eizenberg H. 2019. Modeling microbial communities from atrazine contaminated soils promotes the development of biostimulation solutions. The ISME journal, 13(2), 494..

  4. Ma G, Li J, Li J, Li Y, Gu D, Chen C., ... & Zhang W. 2018. OsMTP11, a trans-Golgi network localized transporter, is involved in manganese tolerance in rice. Plant Science, 274, 59-69.

  5. Xu X, Xu M, Zhao Q, Xia Y, Chen C*, and Zhenguo Shen. 2018. Complete Genome Sequence of Cd (II)-Resistant Arthrobacter sp. PGP41, a Plant Growth-Promoting Bacterium with Potential in Microbe-Assisted Phytoremediation. Current microbiology, 75(9): 1231-1239.

  6. Xu X, Li G, Li L, Su Z, Chen C*. 2017. Genome-wide comparative analysis of putative Pth11-related G protein-coupled receptors in fungi belonging to Pezizomycotina. BMC microbiology, 17(1), 166.

  7. Xu X, Chen C, Zhang Z, Sun Z, Chen Y, Jiang J, Shen Z. 2017. The influence of environmental factors on communities of arbuscular mycorrhizal fungi associated with Chenopodium ambrosioides revealed by MiSeq sequencing investigation. Scientific Reports, 7, 45134; doi: 10.1038/srep45134

  8. Chen C, Lu RS, Zhu SS, Tamaki I, Qiu YX. 2017. Population structure and historical demography of Dipteronia dyeriana (Sapindaceae), an extremely narrow palaeoendemic plant from China: implications for conservation in a biodiversity hot spot. Heredity, 119(2): 95.

  9. Xu XH, Zhang Z, Hu SL, Ruan ZP, Jiang JD, Chen C*, Shen ZG*. 2017. Response of soil bacterial communities to lead and zinc pollution revealed by Illumina MiSeq sequencing investigation. Environmental Science and Pollution Research, 24 (1), 666-675. DOI: 10.1007/s11356-016-7826-3. January

  10. Xu XH, He Q, Chen C*, Zhang CL*. 2016. Differential Communications between Fungi and Host Plants Revealed by Secretome Analysis of Phylogenetically Related Endophytic and Pathogenic Fungi. PloS one, 11(9): e0163368.

  11. Li L, Xu XH, Chen C*, Shen ZG, 2016. Genome-wide characterization and expression analysis of the germin-like protein family in rice and Arabidopsis. International Journal of Molecular Sciences, 17(10), 1622. DOI: 10.3390/ijms17101622

  12. Zhang HX, Xia Y, Chen C, Zhuang K, Song YF, Shen ZG*, 2016. Analysis of copper-binding proteins in rice radicles exposed to excess copper and hydrogen peroxide stress", Frontiers in Plant Science, 7, 1216, DOI: 10.3389/fpls.2016.01216.

  13. He Y, Rui HY, Chen C, Chen YH, Shen ZG*. 2016. The role of roots in the accumulation and removal of cadmium by the aquatic plant Hydrilla verticillata, Environmental Science and Pollution Research, 23 (13), 13308-13316. DOI: 10.1007/s11356-016-6505-8. July

  14. Chen C, Zhang JN, Lu M, Qin C, Chen YH, Yang L, Huang QW, Wang JC, Shen ZG*, Shen QR. 2016. Microbial communities of an arable soil treated for 8 years with organic and inorganic fertilizers. Biology and Fertility of Soils. 52 (4), 455-467. DOI 10.1007/s00374-016-1089-5. May

  15. Chen C, Lei WR, Lu M, Zhang JN, Zhang Z, Luo CL, Chen YH, Hong Q, Shen ZG*. 2016. Characterization of Cu(II) and Cd(II) resistance mechanisms in Sphingobium sp. PHE-SPH and Ochrobactrum sp. PHE-OCH and their potential application in the bioremediation of heavy metal-phenanthrene co-contaminated sites. Environmental Science and Pollution Research, 23 (7), 6861-6872. DOI 10.1007/s11356-015-5926-0. April

  16. Rui HY#, Chen C#, Zhang XX, Shen ZG*, Zhang FQ*. 2016. Cd-induced oxidative stress and lignification in the roots of two Vicia sativa L. varieties with different Cd tolerances. Journal of Hazardous Materials, 301, 304-313. DOI, 10.1016/j.jhazmat.2015.08.052. January

  17. Chen C, Zhang HX, Wang AG, Lu Min, Shen, ZG*, Lian CL*, 2015. Phenotypic plasticity accounts for most of the variation in leaf manganese concentrations in Phytolacca americana growing in manganese-contaminated environments. Plant and Soil. 396, 215-227. DOI 10.1007/s11104-015-2581-7.November

  18. Fu L, Chen C, Wang B, Zhou XS, Li SH, Guo P, Shen ZG, Wang GP, Chen YH*, 2015, Differences in copper absorption and accumulation between copper-exclusion and copper-enrichment plants: a comparison of structure and physiological responses. PLoS ONE, 10(7), e0133424. DOI, 10.1371/journal.pone.0133424. July

  19. Chen C#, Song YF#, Zhuang K, Xia Y, Shen ZG*, 2015. Proteomic analysis of copper-binding proteins in excess copper-stressed roots of two rice (Oryza sativa L.) varieties with different Cu tolerances. PLoS ONE 10(4), e0125367. DOI, 10.1371/journal.pone.0125367. April

  20. Song YF, Zhang HX, Chen C, Wang GP, Zhuang K, Cui J, Shen ZG*, 2014, Proteomic analysis of copper-binding proteins in excess copper-stressed rice roots by immobilized metal affinity chromatography and two-dimensional electrophoresis. BioMetals, 27 (2), 265-276. DOI: 10.1007/s10534-014-9707-x. April

  21. Chen C#, Qi ZC#, Xu XH#, Comes HP, Koch AM, Jin XJ, Fu CX*, & Qiu YX*, 2014, Understanding the formation of Mediterranean–African–Asian disjunctions: evidence for Miocene climate‐driven vicariance and recent long‐distance dispersal in the Tertiary relict Smilax aspera (Smilacaceae). New Phytologist, 204(1): 243-255.

  22. Xu XH, Su ZZ, Wang C, Kubicek CP, ... Chen C, & Zhang CL. 2014, The rice endophyte Harpophora oryzae genome reveals evolution from a pathogen to a mutualistic endophyte. Scientific reports, 4: 5783.

  23. Qi XS #, Chen C #, Comes HP, Sakaguchi S, Liu YH, Tanaka N, Fu CX, & Qiu YX*, 2012,. Molecular data and ecological niche modelling reveal a highly dynamic evolutionary history of the East Asian Tertiary relict Cercidiphyllum (Cercidiphyllaceae). New Phytologist, 196(2), 617-630.

  24. Chen, C., Ren, B. B., Xu, X. H., Fu, C. X., & Qiu, Y. X. * (2011). Isolation and characterization of microsatellite markers for Dipteronia dyerana (Sapindaceae), an endangered endemic species in China. American journal of botany, 98(10), 271-273.

  25. Chen, C., Liu, Y. H., Fu, C. X., & Qiu, Y. X. * (2010). New microsatellite markers for the rare plant Cercidiphyllum japonicum and their utility for Cercidiphyllum magnificum. American journal of botany, 97(9), 82-84.


研究课题:

  1. 国家自然科学基金青年科学基金项目,31400328,美洲商陆耐锰性的适应性进化机制,2015/01-2017/12,24万,主持

  2. 江苏省自然科学基金青年科学基金项目,BK20140697,重金属胁迫下美洲商陆种群适应性进化的分子机制,2014/07-2017/06,19万,主持

  3. 中国博士后基金特别资助项目,美洲商陆种群适应重金属环境的分子遗传机制,2016/07-2017/07,15万,主持

  4. 中国博士后基金面上项目,2014M560428,重金属胁迫下美洲商陆种群的适应性进化机制,2014/09-2016/09,8万,主持

  5. 江苏省博士后基金面上项目,1402155C,锰胁迫下美洲商陆适应性进化机制,2015/01-2016/12,江苏省博士后基金面上项目,1万,主持

  6. 中央高校基本业务费,KJQN201532,美洲商陆耐锰性的适应性进化机制,2015/03-2017/03,10万,主持

  7. 国家重点研发计划,2016YFD0800800,重金属污染农田的植物萃取技术、产品与装备研发,2016/01-2020/12,60万,子课题负责

  8. 国家重点研发计划,2016YFD0800300,农田和农产品重金属源解析与污染特征研究,2016/01-2020/12,73.5万,参加

  9. 中央高校基本业务费自主创新重点项目,KYZ201739,基于BsRADseq技术探究美洲商陆种群适应重金属胁迫机制, 2017.01-2019.12,17.50万,主持

  10. 国家自然科学基金面上项目,31770404,表观遗传和遗传变异在美洲商陆种群适应重金属生境中的作用,2018/01-2020/12,62万,主持


申请发明专利:

  1. 一种锰/镉吸收高效生态型美洲商陆的筛选方法,专利申请号:20170717164.X,申请日:2017年8月21日,主要完成人:陈晨 夏妍 沈振国 陈亚华 陆敏

  2. 一种土荆芥微卫星分子标记及其制备方法和应用,专利申请号:20170812784.X,申请日:2017年9月11日,主要完成人:陈晨 张周 沈振国 陈亚华 夏妍

  3. 一种促进超积累植物生长及强化萃取土壤重金属的生物修复试剂及修复方法,专利申请号:201810155094.8,申请日:2018年02月23日,主要完成人:陈晨 许梦 陈亚华 沈振国

  4. 一种促进植物生长及强化积累土壤重金属的生物修复试剂及修复方法专利申请号:201811625706.1,申请日:2018年12月29日,主要完成人:陈晨 赵启明 许梦 陈亚华 沈振国

  5. 一种修复镉污染土壤并促进植物生长的复合微生物菌肥的制备方法及应用.申请号:20191067755.7,申请日期:2019年7月12日,主要完成人:陈晨 赵启明 徐希辉 陈静 陈亚华 夏妍 沈振国


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